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Biblioteca (s) : |
INIA Treinta y Tres. |
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Fecha : |
31/07/2018 |
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Actualizado : |
11/10/2019 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Autor : |
DOSTER, E.; ROVIRA, P.J.; NOYES, N.R.; BURGESS, B. A.; YANG, X.; WEINROTH, M.D.; LAKIN, S.M.; DEAN, C.J.; LINKE, L.; MAGNUSON, R.; JONES, K.I.; BOUCHER, C.; RUIZ, J.; BELK, K.E.; MORLEY, P.S. |
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Afiliación : |
ENRIQUE DOSTER, Microbial Ecology Group, Colorado State University, USA. Department of Microbiology, Inmunology and Pathology, Colorado State University. USA.; PABLO JUAN ROVIRA SANZ, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay. Microbial Ecology Group, Colorado State University. Department of Microbiology, Imnunology and Pathology, Colorado State University, USA.; NOELLE R. NOYES., Microbial Ecology Group, Colorado State University. Department of Veterinary Population Medicine, University of Minnesota.; BRANDY A. BURGESS, Department of Population Health, University of Georgia, USA.; XIANG YANG, Microbial Ecology Group, Colorado State University. Department of Animal Sciences, Colorado State University, USA.; MARGARET D. WEINROTH, Microbial Ecology Group, Colorado State University. Department of Animal Sciences, Colorado State University, USA.; STEVEN M. LAKIN, Microbial Ecology Group, Colorado State University. Department of Microbiology, Immunology and Pathology, Colorado State University, USA.; CHRISTOPHER J. DEAN, Microbial Ecology Group, Colorado State University. Department of Microbiology, Immunology and Pathology, Colorado State University, USA.; LYNDSEY LINKE, Department of Clinical Sciences, Colorado State University, USA.; ROBERTA MAGNUSON, Department of Clinical Sciences, Colorado State University, USA.; KENNETH I. JONES, Department of Biochemistry and Molecular Genetics, University of Colorado, USA.; CHRISTINA BOUCHER, Department of Computer and Information Science and Engineering, University of Florida, USA.; JAMIE RUIZ, Department of Computer and Information Science and Engineering, University of Florida, USA.; KEITH E. BELK, Microbial Ecology Group, Colorado State University. Department of Microbiology, Imnunology and Pathology, Colorado State University, USA.; PAUL S. MORLEY, Microbial Ecology Group, Colorado State University, USA. Department of Microbiology, Inmunology and Pathology, Colorado State University. USA. |
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Título : |
Investigating effects of tulathromycin metaphylaxis on the fecal resistome and microbiome of commercial feedlot cattle early in the feeding period. |
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Fecha de publicación : |
2018 |
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Fuente / Imprenta : |
Frontier in Microbiology, 2018, 9:1715. |
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Páginas : |
14 p. |
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DOI : |
10.3389/fmicb.2018.01715 |
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Idioma : |
Inglés |
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Notas : |
Article history: Received: 14 April 2018; Accepted: 09 July 2018; Published: 30 July 2018.
Open Access journal.
https://doi.org/10.3389/fmicb.2018.01715 |
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Contenido : |
The objective was to examine effects of treating commercial beef feedlot cattle with therapeutic doses of tulathromycin, a macrolide antimicrobial drug, on changes in the fecal resistome and microbiome using shotgun metagenomic sequencing. Two pens of cattle were used, with all cattle in one pen receiving metaphylaxis treatment (800 mg subcutaneous tulathromycin) at arrival to the feedlot, and all cattle in the other pen remaining unexposed to parenteral antibiotics throughout the study period. Fecal samples were collected from 15 selected cattle in each group just prior to treatment (Day 1), and again 11 days later (Day 11). Shotgun sequencing was performed on isolated metagenomic DNA, and reads were aligned to a resistance and a taxonomic database to identify alignments to antimicrobial resistance (AMR) gene accessions and microbiome content. Overall, we identified AMR genes accessions encompassing 9 classes of AMR drugs and encoding 24 unique AMR mechanisms. Statistical analysis was used to identify differences in the resistome and microbiome between the untreated and treated groups at both timepoints, as well as over time. Based on composition and ordination analyses, the resistome and microbiome were not significantly different between the two groups on Day 1 or on Day 11. However, both the resistome and microbiome changed significantly between these two sampling dates. These results indicate that the transition into the feedlot?and associated changes in diet, geography, conspecific exposure, and environment?may exert a greater influence over the fecal resistome and microbiome of feedlot cattle than common metaphylactic antimicrobial drug treatment. MenosThe objective was to examine effects of treating commercial beef feedlot cattle with therapeutic doses of tulathromycin, a macrolide antimicrobial drug, on changes in the fecal resistome and microbiome using shotgun metagenomic sequencing. Two pens of cattle were used, with all cattle in one pen receiving metaphylaxis treatment (800 mg subcutaneous tulathromycin) at arrival to the feedlot, and all cattle in the other pen remaining unexposed to parenteral antibiotics throughout the study period. Fecal samples were collected from 15 selected cattle in each group just prior to treatment (Day 1), and again 11 days later (Day 11). Shotgun sequencing was performed on isolated metagenomic DNA, and reads were aligned to a resistance and a taxonomic database to identify alignments to antimicrobial resistance (AMR) gene accessions and microbiome content. Overall, we identified AMR genes accessions encompassing 9 classes of AMR drugs and encoding 24 unique AMR mechanisms. Statistical analysis was used to identify differences in the resistome and microbiome between the untreated and treated groups at both timepoints, as well as over time. Based on composition and ordination analyses, the resistome and microbiome were not significantly different between the two groups on Day 1 or on Day 11. However, both the resistome and microbiome changed significantly between these two sampling dates. These results indicate that the transition into the feedlot?and associated changes in diet, geography... Presentar Todo |
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Palabras claves : |
METAGENOMICS; METAPHYLAXIS; MICROBIOME; RESISTOME; TULATHROMYCIN. |
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Thesagro : |
BOVINOS; FEEDLOT. |
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Asunto categoría : |
L73 Enfermedades de los animales |
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URL : |
http://www.ainfo.inia.uy/digital/bitstream/item/10933/1/fmicb-09-01715.pdf
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Marc : |
LEADER 02931naa a2200409 a 4500
001 1058855
005 2019-10-11
008 2018 bl uuuu u00u1 u #d
024 7 $a10.3389/fmicb.2018.01715$2DOI
100 1 $aDOSTER, E.
245 $aInvestigating effects of tulathromycin metaphylaxis on the fecal resistome and microbiome of commercial feedlot cattle early in the feeding period.$h[electronic resource]
260 $c2018
300 $a14 p.
500 $aArticle history: Received: 14 April 2018; Accepted: 09 July 2018; Published: 30 July 2018. Open Access journal. https://doi.org/10.3389/fmicb.2018.01715
520 $aThe objective was to examine effects of treating commercial beef feedlot cattle with therapeutic doses of tulathromycin, a macrolide antimicrobial drug, on changes in the fecal resistome and microbiome using shotgun metagenomic sequencing. Two pens of cattle were used, with all cattle in one pen receiving metaphylaxis treatment (800 mg subcutaneous tulathromycin) at arrival to the feedlot, and all cattle in the other pen remaining unexposed to parenteral antibiotics throughout the study period. Fecal samples were collected from 15 selected cattle in each group just prior to treatment (Day 1), and again 11 days later (Day 11). Shotgun sequencing was performed on isolated metagenomic DNA, and reads were aligned to a resistance and a taxonomic database to identify alignments to antimicrobial resistance (AMR) gene accessions and microbiome content. Overall, we identified AMR genes accessions encompassing 9 classes of AMR drugs and encoding 24 unique AMR mechanisms. Statistical analysis was used to identify differences in the resistome and microbiome between the untreated and treated groups at both timepoints, as well as over time. Based on composition and ordination analyses, the resistome and microbiome were not significantly different between the two groups on Day 1 or on Day 11. However, both the resistome and microbiome changed significantly between these two sampling dates. These results indicate that the transition into the feedlot?and associated changes in diet, geography, conspecific exposure, and environment?may exert a greater influence over the fecal resistome and microbiome of feedlot cattle than common metaphylactic antimicrobial drug treatment.
650 $aBOVINOS
650 $aFEEDLOT
653 $aMETAGENOMICS
653 $aMETAPHYLAXIS
653 $aMICROBIOME
653 $aRESISTOME
653 $aTULATHROMYCIN
700 1 $aROVIRA, P.J.
700 1 $aNOYES, N.R.
700 1 $aBURGESS, B. A.
700 1 $aYANG, X.
700 1 $aWEINROTH, M.D.
700 1 $aLAKIN, S.M.
700 1 $aDEAN, C.J.
700 1 $aLINKE, L.
700 1 $aMAGNUSON, R.
700 1 $aJONES, K.I.
700 1 $aBOUCHER, C.
700 1 $aRUIZ, J.
700 1 $aBELK, K.E.
700 1 $aMORLEY, P.S.
773 $tFrontier in Microbiology, 2018, 9:1715.
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Registro original : |
INIA Treinta y Tres (TT) |
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Biblioteca (s) : |
INIA Tacuarembó. |
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Fecha actual : |
20/10/2017 |
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Actualizado : |
10/10/2018 |
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Tipo de producción científica : |
Abstracts/Resúmenes |
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Autor : |
BALMELLI, G.; SIMETO, S.; TORRES, D.; HIRIGOYEN, A.; CASTILLO, A.; ALTIER, N.; PÉREZ, G.; DIEZ, J. |
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Afiliación : |
GUSTAVO DANIEL BALMELLI HERNANDEZ, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; SOFIA SIMETO FERRARI, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; DIEGO GABRIEL TORRES DINI, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; NORA ADRIANA ALTIER MANZINI, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay. |
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Título : |
Productivity losses caused by Teratosphaeria nubilosa on Eucalyptus globulus and Eucalyptus maidenii in Uruguay. [Resumen]. |
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Fecha de publicación : |
2017 |
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Fuente / Imprenta : |
In: Anniversary Congress, 125th, 19-22 September, Freiburg, Germany, 2017. |
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Páginas : |
p. 187 |
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Idioma : |
Inglés |
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Contenido : |
Teratosphaeria nubilosa severely affects young plantations of Eucalyptus globulus and E. maidenii in Uruguay. This work analyzes the
effect of this pathogen on the growth and survival of both species, based on data from a naturally infected field trial. The degree of defoliation was quantified at 21 months old, and its effects on diameter and mortality were evaluated at 62 months old. Defoliation in E. globulus was higher than in E. maidenii, with an average of 52.5 and 28.8%, respectively. Four years after the epidemic, defoliation classes of 40% or higher had significant growth losses on E. globulus, while losses in E. maidenii were significant when defoliation was 30% or higher. An average loss in DAP of 27.5 % in E. globulus and 12.5 % in E. maidenii was observed. The most affected trees, with 70-80% of defoliation in E. globulus and 60% in E. maidenii, had similar growth loss in both species, suffering a reduction in DAP of 43.9% and 42.5%, respectively. By contrast, the average mortality that occurred between 21 and 62 months old was significantly higher in E. globulus (16.7%) than in E. maidenii (3.3%). Mortality in the higher defoliation classes reached 44.7% on E. globulus and 47.1% on E. maidenii. Although E. globulus showed greater susceptibility to the disease and higher productivity losses, the significant defoliation and growth losses registered in E. maidenii suggest that this species is not as suitable as previously thought to replace E. globulus on sites with high risk of T. nubilosa. MenosTeratosphaeria nubilosa severely affects young plantations of Eucalyptus globulus and E. maidenii in Uruguay. This work analyzes the
effect of this pathogen on the growth and survival of both species, based on data from a naturally infected field trial. The degree of defoliation was quantified at 21 months old, and its effects on diameter and mortality were evaluated at 62 months old. Defoliation in E. globulus was higher than in E. maidenii, with an average of 52.5 and 28.8%, respectively. Four years after the epidemic, defoliation classes of 40% or higher had significant growth losses on E. globulus, while losses in E. maidenii were significant when defoliation was 30% or higher. An average loss in DAP of 27.5 % in E. globulus and 12.5 % in E. maidenii was observed. The most affected trees, with 70-80% of defoliation in E. globulus and 60% in E. maidenii, had similar growth loss in both species, suffering a reduction in DAP of 43.9% and 42.5%, respectively. By contrast, the average mortality that occurred between 21 and 62 months old was significantly higher in E. globulus (16.7%) than in E. maidenii (3.3%). Mortality in the higher defoliation classes reached 44.7% on E. globulus and 47.1% on E. maidenii. Although E. globulus showed greater susceptibility to the disease and higher productivity losses, the significant defoliation and growth losses registered in E. maidenii suggest that this species is not as suitable as previously thought to replace E. globulus on sites wit... Presentar Todo |
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Palabras claves : |
DEFOLIATION; DISEASE; GROWTH LOSSES; MORTALITY. |
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Thesagro : |
ENFERMEDADES DE LAS PLANTAS. |
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Asunto categoría : |
H01 Protección de plantas - Aspectos generales |
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URL : |
http://www.ainfo.inia.uy/digital/bitstream/item/7396/1/bALMELLI-2017.pdf
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Marc : |
LEADER 02314nam a2200265 a 4500
001 1057689
005 2018-10-10
008 2017 bl uuuu u00u1 u #d
100 1 $aBALMELLI, G.
245 $aProductivity losses caused by Teratosphaeria nubilosa on Eucalyptus globulus and Eucalyptus maidenii in Uruguay. [Resumen].$h[electronic resource]
260 $aIn: Anniversary Congress, 125th, 19-22 September, Freiburg, Germany$c2017
300 $ap. 187
520 $aTeratosphaeria nubilosa severely affects young plantations of Eucalyptus globulus and E. maidenii in Uruguay. This work analyzes the effect of this pathogen on the growth and survival of both species, based on data from a naturally infected field trial. The degree of defoliation was quantified at 21 months old, and its effects on diameter and mortality were evaluated at 62 months old. Defoliation in E. globulus was higher than in E. maidenii, with an average of 52.5 and 28.8%, respectively. Four years after the epidemic, defoliation classes of 40% or higher had significant growth losses on E. globulus, while losses in E. maidenii were significant when defoliation was 30% or higher. An average loss in DAP of 27.5 % in E. globulus and 12.5 % in E. maidenii was observed. The most affected trees, with 70-80% of defoliation in E. globulus and 60% in E. maidenii, had similar growth loss in both species, suffering a reduction in DAP of 43.9% and 42.5%, respectively. By contrast, the average mortality that occurred between 21 and 62 months old was significantly higher in E. globulus (16.7%) than in E. maidenii (3.3%). Mortality in the higher defoliation classes reached 44.7% on E. globulus and 47.1% on E. maidenii. Although E. globulus showed greater susceptibility to the disease and higher productivity losses, the significant defoliation and growth losses registered in E. maidenii suggest that this species is not as suitable as previously thought to replace E. globulus on sites with high risk of T. nubilosa.
650 $aENFERMEDADES DE LAS PLANTAS
653 $aDEFOLIATION
653 $aDISEASE
653 $aGROWTH LOSSES
653 $aMORTALITY
700 1 $aSIMETO, S.
700 1 $aTORRES, D.
700 1 $aHIRIGOYEN, A.
700 1 $aCASTILLO, A.
700 1 $aALTIER, N.
700 1 $aPÉREZ, G.
700 1 $aDIEZ, J.
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